2024:

A higher-yield hybrid rice is achieved by assimilating a dominant heterotic gene in inbred parental lines
Changsheng Wang, Ziqun Wang, Yunxiao Cai, Zhou Zhu, Danheng Yu, Lei Hong, Yongchun Wang, Wei Lv, Qiang Zhao, Lizhen Si, Kun Liu, Bin Han
First published: 07 March 2024 https://doi.org/10.1111/pbi.14295   PDF

High-throughput UAV-based rice panicle detection and genetic mapping of heading-date-related traits
Rulei Chen,Hengyun Lu,Yongchun Wang,Qilin Tian,Congcong Zhou,Ahong Wang,Qi Feng,Songfu Gong,Qiang Zhao,Bin Han
Front. Plant Sci., 06 March 2024 Sec. Plant Bioinformatics Volume 15 - 2024 | https://doi.org/10.3389/fpls.2024.1327507   PDF

Dynamics of extrachromosomal circular DNA in rice
Jundong Zhuang, Yaoxin Zhang, Congcong Zhou, Danlin Fan, Tao Huang, Qi Feng, Yiqi Lu, Yan Zhao, Qiang Zhao, Bin Han & Tingting Lu
Nature Communications volume 15, Article number: 2413 (2024) https://doi.org/10.1038/s41467-024-46691-0   PDF

2023:

Structure and function of rice hybrid genomes reveal genetic basis and optimal performance of heterosis
Zhoulin Gu, Junyi Gong, Zhou Zhu, Zhen Li, Qi Feng, Changsheng Wang, Yan Zhao, Qilin Zhan, Congcong Zhou, Ahong Wang, Tao Huang, Lei Zhang, Qilin Tian, Danlin Fan, Yiqi Lu, Qiang Zhao, Xuehui Huang, Shihua Yang & Bin Han
Nat Genet (2023). https://doi.org/10.1038/s41588-023-01495-8   PDF

The WD40 domain-containing protein Ehd5 positively regulates flowering in rice (Oryza sativa)
Xuening Zhang, Qi Feng, Jiashun Miao, Jingjie Zhu, Congcong Zhou, Danlin Fan, Yiqi Lu, Qilin Tian, Yongchun Wang, Qilin Zhan, Zi-Qun Wang, Ahong Wang, Lei Zhang, Yingying Shangguan, Wenjun Li, Jiaying Chen, Qijun Weng, Tao Huang, Shican Tang, Lizhen Si, Xuehui Huang, Zi-Xuan Wang, Bin Han
The Plant Cell, 2023;, koad223, https://doi.org/10.1093/plcell/koad223   PDF

Armadillo repeat only protein GS10 negatively regulates brassinosteroid signaling to control rice grain size
Erwang Chen, Qingqing Hou, Kun Liu, Zhoulin Gu, Bingxin Dai, Ahong Wang, Qi Feng, Yan Zhao, Congcong Zhou, Jingjie Zhu, Yingying Shangguan, Yongchun Wang, Danfeng Lv, Danlin Fan, Tao Huang, Zixuan Wang, Xuehui Huang, Bin Han
Plant Physiology, Volume 192, Issue 2, June 2023, Pages 967–981, https://doi.org/10.1093/plphys/kiad117   PDF

2022:

A retrotransposon insertion in MUTL-HOMOLOG 1 affects wild rice seed set and cultivated rice crossover rate
Kun Liu , Erwang Chen , Zhoulin Gu , Bingxin Dai , Ahong Wang , Zhou Zhu , Qi Feng, Congcong Zhou , Jingjie Zhu , Yingying Shangguan , Yongchun Wang, Zhen Li , Qingqing Hou , Danfeng Lv, Changsheng Wang, Tao Huang , Zixuan Wang , Xuehui Huang, Bin Han
Plant Physiol. 2022 Oct 27;190(3):1747-1762.doi: 10.1093/plphys/kiac378.   PDF

AirMeasurer: open-source software to quantify static and dynamic traits derived from multiseason aerial phenotyping to empower genetic mapping studies in rice
Gang Sun,Hengyun Lu,Yan Zhao,Jie Zhou,Robert Jackson,Yongchun Wang,Ling-xiang Xu,Ahong Wang,Joshua Colmer,Eric Ober,Qiang Zhao,Bin Han,Ji Zhou
New Phytologist. 2022 July 28; https://doi.org/10.1111/nph.18314   PDF

Twenty years of rice genomics research: From sequencing and functional genomics to quantitative genomics
Changsheng Wang , Bin Han
Mol Plant. 2022 Apr 4;15(4):593-619.doi: 10.1016/j.molp.2022.03.009.   PDF

2021:

Cytoplasmic and nuclear genome variations of rice hybrids and their parents inform the trajectory and strategy of hybrid rice breeding
Zhoulin Gu1,2, Zhou Zhu1,2, Zhen Li1,3, Qilin Zhan1, Qi Feng1, Congcong Zhou1, Qiang Zhao1,Yan Zhao1, Xiaojian Peng1,4, Bingxin Dai1,5,Rongrong Sun1,2, Yan Li1, Hengyun Lu1, Lei Zhang1,Tao Huang1, Junyi Gong6, Danfeng Lv1, Xuehui Huang7 and Bin Han1,*.
Mol Plant. 2021 Aug 11;S1674-2052(21)00320-8.doi: 10.1016/j.molp.2021.08.007.   PDF

Subtelomeric assembly of a multi-gene pathway for antimicrobial defense compounds in cereals
Yan Li, Aymeric Leveau, Qiang Zhao, Qi Feng, Hengyun Lu, Jiashun Miao, Zheyong Xue, Azahara C. Martin, Eva Wegel, Jing Wang, Anastasia Orme, Maria-Dolores Rey, Miroslava Karafiátová, Jan Vrána, Burkhard Steuernagel, Ryan Joynson, Charlotte Owen, James Reed, Thomas Louveau, Michael J. Stephenson, Lei Zhang, Xuehui Huang, Tao Huang, Danling Fan, Congcong Zhou, Qilin Tian, Wenjun Li, Yiqi Lu, Jiaying Chen, Yan Zhao, Ying Lu, Chuanrang Zhu, Zhenhua Liu, Guy Polturak, Rebecca Casson, Lionel Hill, Graham Moore, Rachel Melton, Neil Hall, Brande B. H. Wulff, Jaroslav Doležel, Tim Langdon, Bin Han & Anne Osbourn.
Nat Commun. 2021 May 7;12(1):2563. doi: 10.1038/s41467-021-22920-8.  PDF

Chromosome-scale assembly and analysis of biomass crop Miscanthus lutarioriparius genome
Jiashun Miao , Qi Feng , Yan Li , Qiang Zhao , Congcong Zhou , Hengyun Lu, Danlin Fan , Juan Yan, Yiqi Lu , Qilin Tian , Wenjun Li , Qijun Weng, Lei Zhang , Yan Zhao , Tao Huang , Laigeng Li, Xuehui Huang, Tao Sang , Bin Han.
Nat Commun. 2021 Apr 28;12(1):2458.doi: 10.1038/s41467-021-22738-4.   PDF

2020:

Designing future crops: challenges and strategies for sustainable agriculture
Zhixi Tian , Jia-Wei Wang , Jiayang Li, and Bin Han.
Plant J.2021 Mar;105(5):1165-1178.doi:10.1111/tpj.15107.   PDF

2019:

The Genomics of Oryza Species Provides Insights into Rice Domestication and Heterosis
Erwang Chen, Xuehui Huang,Zhixi Tian,Rod A.Wing,and Bin Han.
Annu. Rev. Plant Biol. 2019. 70:639–65. doi: 10.1146/annurev-arplant-050718-100320.   PDF

Dissecting a heterotic gene through GradedPool-Seq mapping informs a rice-improvement strategy.
Changsheng Wang, Shican Tang, Qilin Zhan, Qingqing Hou, Yan Zhao, Qiang Zhao, Qi Feng, Congcong Zhou, Danfeng Lyu, Lingling Cui, Yan Li, Jiashun Miao, Chuanrang Zhu, Yiqi Lu, Yongchun Wang, Ziqun Wang, Jingjie Zhu, Yingying Shangguan, Junyi Gong, Shihua Yang, Wuqi Wang, Jianfu Zhang, Huaan Xie, Xuehui Huang & Bin Han.
Nature Communicationsvolume 10, Article number: 2982 (2019). doi: 10.1038/s41467-019-11017-y.   PDF

The PLATZ transcription factor GL6 affects grain length and number in rice.
Ahong Wang, Qingqing Hou, Lizhen Si, Xuehui Huang, Jianghong Luo, Danfeng Lu, Jingjie Zhu, Yingying Shangguan, Jiashun Miao, Yifan Xie, Yongchun Wang, Qiang Zhao, Qi Feng, Congcong Zhou, Yan Li, Danlin Fan, Yiqi Lu, Qilin Tian, Zixuan Wang, Bin Han.
Plant Physiol. 2019 May 28. pii: pp.01574.2018. doi: 10.1104/pp.18.01574. .   PDF

2018:

Sequence divergence between spelt and common wheat.
Liu M, Zhao Q, Qi F, Stiller J, Tang S, Miao J, Vrána J, Holu?ová K, Liu D, Dole?el J, Manners JM, Han B, Liu C.
Theor Appl Genet. 2018 Feb 9. doi: 10.1007/s00122-018-3064-z. [Epub ahead of print]   PDF

Pan-genome analysis highlights the extent of genomic variation in cultivated and wild rice.
Qiang Zhao, Qi Feng, Hengyun Lu, Yan Li, Ahong Wang, Qilin Tian, Qilin Zhan, Yiqi Lu, Lei Zhang, Tao Huang, Yongchun Wang, Danlin Fan, Yan Zhao, Ziqun Wang, Congcong Zhou, Jiaying Chen, Chuanrang Zhu, Wenjun Li, Qijun Weng, Qun Xu, Zi-Xuan Wang, Xinghua Wei, Bin Han & Xuehui Huang
Nature Genetics (2018); doi:10.1038/s41588-018-0041-z.   PDF

2017:

Dissecting the Genetic Basis of Grain Shape and Chalkiness Traits in Hybrid Rice Using Multiple Collaborative Populations
Junyi Gong, Jiashun Miao, Yan Zhao, Qiang Zhao, Qi Feng, Qilin Zhan, Benyi Cheng, Junhui Xia, Xuehui Huang4, Shihua Yang, and Bin Han.
Molecular Plant. 2017; 10(10):1353-1356; DOI 10.1016/j.molp.2017.07.014.   PDF

Genomic insights into divergence and dual domestication of cultivated allotetraploid cottonse.
Lei Fang†, Hao Gong†, Yan Hu†, Chunxiao Liu†, Baoliang Zhou, Tao Huang, Yangkun Wang, Shuqi Chen, David D. Fang, Xiongming Du, Hong Chen, Jiedan Chen, Sen Wang, Qiong Wang, Qun Wan, Bingliang Liu, Mengqiao Pan, Lijing Chang, Huaitong Wu, Gaofu Mei, Dan Xiang, Xinghe Li, Caiping Cai, Xiefei Zhu, Z. Jeffrey Chen, Bin Han, Xiaoya Chen, Wangzhen Guo, Tianzhen Zhang and Xuehui Huang
Genome Biology. 2017; DOI 10.1186/s13059-017-1167-5.   PDF

How can rice genetics benefit from rice- domestication study?
Erwang Chen, Xuehui Huang, Bin Han
National Science Review. 2016; DOI 10.1093/nsr/nww039.   PDF

Genomics: Decoding the ancestors of peanut
Bin Han
Nat Plants. 2016; DOI 10.1038/nplants.2016.42.   PDF

Genomic architecture of heterosis for yield traits in rice.
Xuehui Huang, Shihua Yang, Junyi Gong, Qiang Zhao, Qi Feng, Qilin Zhan, Yan Zhao, Wenjun Li, Benyi Cheng, Junhui Xia, Neng Chen, Tao Huang, Lei Zhang, Danlin Fan, Jiaying Chen, Congcong Zhou, Yiqi Lu, Qijun Weng & Bin Han.
Nature 2016; doi:10.1038/nature19760. LINK

OsSPL13 controls grain size in cultivated rice.
Si LZ, Chen JY, Huang XH, Gong H, Luo JH, Hou QQ, Zhou TY, Lu TT, Zhu JJ, Shangguan YY, Chen EW, Gong CX, Zhao Q, Jing YF, Zhao Y, Li Y, Cui LL, Fan DL, Lu YQ, Weng QJ, Wang YC, Zhan QL, Liu KY, Wei XH, An K, An G, Han B.
Nature Genet 2016; 48:447-456. LINK

2015:

Transcriptome-wide investigation of circular RNAs in rice.
Lu TT, Cui LL, Zhou Y, Zhu CR, Fan DL, Gong H, Zhao Q, Zhou CC, Zhao Y, Lu DF, Luo JH, Wang YC, Tian QL, Feng Q, Huang T, Han B.
RNA 2015; 21:2076-2087. LINK

An-2 encodes a cytokinin synthesis enzyme that regulates awn length and grain production in rice.
Gu BG, Zhou TY, Luo JH, Liu H, Wang YC, Shangguan YY, Zhu JJ, Li Y, Sang T, Wang ZX, Han B.
Molecular Plant 2015; 8:1635-1650. LINK

The draft genome of the grass carp (Ctenopharyngodon idellus) provides insights into its evolution and vegetarian adaptation.
Wang YP, Lu Y, Zhang Y, Ning ZM, Li Y, Zhao Q, Lu HY, Huang R, Xia XQ, Feng Q, Liang XF, Liu KY, Zhang L, Lu TT, Huang T, Fan DL, Weng QJ, Zhu CR, Lu YQ, Li WJ, Wen ZR, Zhou CC, Tian QL, Kang XJ, Shi MJ, Zhang WT, Jang SH, Fu FK, He S, Liao LJ, Li YM, Gui B, He HH, Ning Z, Yang C, He LB, Luo LF, Yang R, Luo Q, Liu XC, Li SS, Huang W, Xiao L, Lin HR, Han B, Zhu ZY.
Nature Genet 2015; 47:625-631. LINK

Comparative Population Genomics Reveals Strong Divergence and Infrequent Introgression between Asian and African Rice.
Huang XH, Zhao Q, Han B.
Molecular Plant 2015; 8:958-960. LINK

Genomic analysis of hybrid rice varieties reveals numerous superior alleles that contribute to heterosis.
Huang XH, Yang SH, Gong JY, Zhao Y, Feng Q, Gong H, Li WJ, Zhan QL, Cheng BY, Xia JH, Chen N, Hao ZN, Liu HY, Zhu CR, Huang T, Zhao Q, Zhang L, Fan DL, Zhou CC, Lu YQ, Weng QJ, Wang Z-X, Li JY, Han B.
Nature Communications 2015; 6:6258. LINK Comments from Nature Plants PDF

2014:

Research institutes spearhead rice study in China.
Li JY, Wan JM, Han B, Chong K, Qian Q, Fu XD, Wang YH, Mao L.
Nature Outlook 2014; Vol. 514 No. 7524_supp ppS49-S74. LINK< /FONT>

Natural variation and genome-wide association studies in crop plants.
Huang X, Han B.
Annu. Rev. Plant Biol. 2014; 65:4.1 -4.21. PDF< /FONT>

2013:

An-1 encodes a basic Helix-Loop-Helix protein that regulates awn development, grain size, and grain number in rice.
Luo J, Liu H, Zhou T, Gu B, Huang X, Shangguan Y, Zhu J, Li Y, Zhao Y, Wang Y, Zhao Q, Wang AH, Wang ZQ, Sang T, Wang ZX, Han B.
Plant Cell 2013; 25:3360-3376. PDF< /P>

The rice OsLTP6 gene promoter directs anther?specific expression by a combination of positive and negative regulatory elements.
Liu X, Shangguan Y, Zhu J, Lu Y, Han B.
Planta 2013; 238:845-857. PDF< /P>

A haplotype map of genomic variations and genome-wide association studies of agronomic traits in foxtail millet (Setaria italica)
Jia G, Huang X, Zhi H, Zhao Y, Zhao Q, Li W, Chai Y, Yang L, Liu K, Lu H, Zhu C, Lu Y, Zhou C, Fan D, Weng Q, Guo Y, Huang T, Zhang L, Feng Q, Hao H, Liu H, Lu P, Zhang N, Li Y, Guo E, Wang S, Wang S, Liu J, Zhang W, Chen G, Zhang B, Li W, Wang Y, Li H, Zhao B, Li J, Diao X, Han B.
Nature Genet. 2013; 45: 957-961. LINK< /P>

Sequencing-based genome-wide association study in rice.
Han B, Huang X.
Curr Opin Plant Biol. 2013; 16: 133- 138. LINK

The draft genome of the fast-growing non-timber forest species moso bamboo (Phyllostachys heterocycla).
Peng ZH,Lu Y,Li L,Zhao Q,Feng Q,Gao ZM,Lu HY,Hu T,Yao N,Liu KY,Li Y,Fan DL,Guo GL,Li WJ,Lu YQ,Weng QJ,Zhou CC, Zhang L,Huang T,Zhao Y,Zhu CR,Liu X,Yang XW,Wang T,Miao k,Zhuang ZY,Cao XL,Tang WL,Li GS,Liu YL,Chen J,Liu ZJ,Yuan LC,Liu ZH,Huang XH,Lu TT,Fei BH,Ning ZM,Han B,Jiang ZH.
Nature Genet. 2013; 45: 456-461. [36.377] LINK

Resequencing rice genomes: an emerging new era of rice genomics.
Huang X, Lu T, Han B.
Trends Genet. 2013; 29: 225-232. [10.064] LINK

2012:

Strand-specific RNA-seq reveals widespread occurrence of novel cis-natural antisense transcripts in rice.
Lu T, Zhu C, Lv G, Guo Y, Zhou Y, Zhang Z, Zhao Y, Li W, Lu Y, Tang W, Feng Q, Han B.
BMC Genomics 2012; 13: 721. [IF: 4.07] LINK

A map of rice genome variation reveals the origin of cultivated rice.
Huang X, Kurata N, Wei X, Wang Z-X, Wang A, Zhao Q, Zhao Y, Liu K, Lu H, Li W, Guo Y, Lu Y, Zhou C, Fan D, Weng Q, Zhu C, Huang T, Zhang L, Wang Y, Feng L, Furuumi H, Kubo T, Miyabayashi T, Yuan X, Xu Q, Dong G, Zhan Q, Li C, Fujiyama A, Toyoda A, Lu T, Feng Q, Qian Q, Li J, Han B.
Nature 2012; 490: 497-501. [IF: 36.28] LINK

Identification of QTLs for eight agronomically important traits using an ultra- high-density map based on SNPs generatd from high-throughput sequencing in sorghum under contrasting photoperiods.
Zou G, Zhai G, Feng Q, Yan S, Wang A, Zhao Q, Shao J, Zhang Z, Zou J, Han B*, Tao Y*.
J. EXP. BOT. 2012; 63: 5451-5462. [IF: 5.364]  PDF

A pyramid breeding of eight grain-yield related quantitative trait loci based on marker-assistant and phenotype selection in rice (Oryza sativa L.)
Zong G, Wang A, Wang L, Liang G, Gu M, Sang T, Han B.
J. Genet. Genomics 2012; 39: 335-350. [IF: 1.883]  PDF

Nature Genetics | News and Views
A crop of maize variants.
Huang XH, Han B.
Nature Genet. 2012; 44: 734-735. PDF

Genetic control of seed shattering in rice by the APETALA2 transcription factor SHATTERING ABORTION1.
Zhou Y, Lu D, Li C, Luo J, Zhu B, Zhu J, Shangguan Y, Wang Z, Sang T, Zhou B, Han B.
Plant Cell 2012; 24: 1034-1048. [IF: 9.396]  PDF Comments from The Plant Cell

Genome-wide association study of flowering time and grain yield traits in a worldwide collection of rice germplasm.
Huang X, Zhao Y, Wei X, Li C, Wang A, Zhao Q, Li W, Guo Y, Deng L, Zhu C, Fan D, Lu Y, Weng Q, Liu K, Zhou T, Jing Y, Si L, Dong G, Huang T, Lu T, Feng Q, Qian Q, Li J, Han B.
Nature Genet. 2012; 44: 32-39. [IF: 36.377]  PDF

2011:

Genetic Control of a Transition from Black to Straw- white Seed Hull in Rice Domestication.
Zhu B, Si L, Wang Z, Zhou Y, Zhu J, Shangguan Y, Lv D, Fan D, Li C, Lin H, Qian Q, Sang T, Zhou B, Minobe Y, Han B.

Plant Physiol. 2011; 155: 1301-1311. [IF: 6.451] PMID:21263038   PDF

Mapping 49 quantitative trait loci at high resolution through sequencing-based genotyping of rice recombination inbred lines.
Wang L, Wang A, Huang X, Zhao Q, Dong G, Qian Q, Sang T, Han B.
Theor Appl Genet. 2011; 122: 327-340. [IF: 3.264]
PMID: 20878143   PDF < /FONT>

2010:

Developing high throughput genotyped chromosome segment substitution lines based on population whole-genome re-sequencing in rice (Oryza sativa L.).
Xu J, Zhao Q, Du P, Xu C, Wang B, Feng Q, Liu Q, Tang S, Gu M, Han B, Liang G.
BMC Genomics 2010; 11: 656. [IF: 4.206]
PMID: 21106060  PDF

Genome-wide association studies of 14 agronomic traits in rice landraces.
Huang X, Wei X, Sang T, Zhao Q, Feng Q, Zhao Y, Li C, Zhu C, Lu T, Zhang Z, Li M, Fan D, Guo Y, Wang A, Wang L, Deng L, Li W, Lu Y, Weng Q, Liu K, Huang T, Zhou T, Jing Y, Li W, Lin Z, Buckler ES, Qian Q, Zhang Q, Li J, Han B.
Nature Genet. 2010; 42: 961- 967. [IF: 36.377]
PMID: 20972439  PDF  Remarks from Nature Genet. from Nature Rev. Genet. from NatureChina 

SEG-Map: A novel software for genotype calling and genetic map construction from next-generation sequencing.
Zhao Q, Huang X, Lin Z, Han B.
Rice 2010; 3: 98-102. [IF: 2.900]
PDF

Function annotation of the rice transcriptome at single-nucleotide resolution by RNA-seq.
Lu T, Lu G, Fan D, Zhu C, Li W, Zhao Q, Feng Q, Zhao Y, Guo Y, Li W, Huang X, Han B.
Genome Res. 2010; 20: 1238-49. [IF: 13.588]
PMID: 20627892  PDF PDF_corrected

Genome-wide characterization of the biggest grass, bamboo, based on 10,608 putative full-length cDNA sequences.
Peng Z, Lu T, Li L, Liu X, Gao Z, Hu T, Yang X, Feng Q, Guan J, Weng Q, Fan D, Zhu C, Lu Y, Han B, Jiang Z.
BMC Plant Biol. 2010; 10: 116. [IF: 4.085]
PMID: 0565830   PDF

2009:

Dwarf 88, a novel putative esterase gene affecting architecture of rice plant.
Gao Z, Qian Q, Liu X, Yan M, Feng Q, Dong G, Liu J, Han B.
Plant Mol Biol. 2009; 71: 265-76. [IF: 4.149]
PMID: 19603144   PDF

High-throughput genotyping by whole-genome resequencing.
Huang X, Feng Q, Qian Q, Zhao Q, Wang L, Wang A, Guan J, Fan D, Weng Q, Huang T, Dong G, Sang T, Han B.
Genome Res. 2009; 19: 1068-76. [IF: 13.588]
PMID: 19420380   PDF

The Magnaporthe oryzae avirulence gene AvrPiz-t encodes a predicted secreted protein that triggers the immunity in rice mediated by the blast resistance gene Piz- t.
Li W, Wang B, Wu J, Lu G, Hu Y, Zhang X, Zhang Z, Zhao Q, Feng Q, Zhang H, Wang Z, Wang G, Han B, Wang Z, Zhou B.
Mol Plant Microbe Interact. 2009; 22: 411-20. [IF: 4.010]
PMID: 19271956   PDF

Evolutionary conservation of neighbouring gene pairs in plants.
Liu X, Han B.
Gene. 2009; 437: 71-9. [IF: 2.266]
PMID: 19264115   PDF

Overexpression of a NAC transcription factor enhances rice drought and salt tolerance.
Zheng X, Chen B, Lu G, Han B.
Biochem Biophys Res Commun. 2009; 379: 985-9. [IF: 2.595]
PMID: 19135985   PDF

Evolutionary and expression study of the aldehyde dehydrogenase (ALDH) gene superfamily in rice (Oryza sativa).
Gao C, Han B.
Gene. 2009; 431: 86-94. [IF: 2.266]
PMID: 19071198    PDF

Analysis of collinear regions of Oryza AA and CC genomes.
Feng Q, Huang T, Zhao Q, Zhu J, Lin Z, Han B.
J Genet Genomics. 2009; 36: 667-77. [IF: 1.494]
PMID: 19932463   PDF

Identification of OsbZIP72 as a positive regulator of ABA response and drought tolerance in rice.
Lu G, Gao C, Zheng X, Han B.
Planta 2009; 229: 605-15. [IF: 3.098]
PMID: 19048288   PDF

Genome-wide survey and expression profiling of heat shock proteins and heat shock factors revealed overlapped and stress specific response under abiotic stresses in rice.
Hu W, Hu G, Han B.
Plant Sci. 2009; 176: 583-90. [IF, , : 2.481]
PDF

2008:

RICD: a rice indica cDNA database resource for rice functional genomics.
Lu T, Huang X, Zhu C, Huang T, Zhao Q, Xie K, Xiong L, Zhang Q, Han B.
BMC Plant Biol. 2008; 8: 118. [IF: 4.085]
PMID: 19036133    PDF

Rice genome research: current status and future perspectives.
Han B, Zhang Q.
Plant Genome 2008; 1: 71- 6.
PDF

Collection and comparative analysis of 1888 full-length cDNAs from wild rice Oryza rufipogon Griff. W1943.
Lu T, Yu S, Fan D, Mu J, Shangguan Y, Wang Z, Minobe Y, Lin Z, Han B.
DNA Res. 2008; 15: 285-95. [IF: 4.754]
PMID: 18687674   PDF

Genome-wide analysis of transposon insertion polymorphisms reveals intraspecific variation in cultivated rice.
Huang X, Lu G, Zhao Q, Liu X, Han B.
Plant Physiol. 2008; 148: 25-40. [IF: 6.451]
PMID: 18650402   PDF

2007:

,

A collection of 10,096 indica rice full-length cDNAs reveals highly expressed sequence divergence between Oryza sativa indica and japonica subspecies.
Liu X, Lu T, Yu S, Li Y, Huang Y, Huang T, Zhang L, Zhu J, Zhao Q, Fan D, Mu J, Shangguan Y, Feng Q, Guan J, Ying K, Zhang Y, Lin Z, Sun Z, Qian Q, Lu Y, Han B.
Plant Mol Biol. 2007; 65: 403-15. [IF: 4.149]
PMID: 17522955  PDF

Rice functional genomics research in China.
Han B, Xue Y, Li J, Deng XW, Zhang Q.
Philos Trans R Soc Lond B Biol Sci. 2007; 362: 1009-21. [IF: 6.053]
PMID: 17347106   PDF

Genome, -wide analysis of the auxin response factors (ARF) gene family in rice (Oryza sativa).
Wang D, Pei K, Fu Y, Sun Z, Li S, Liu H, Tang K, Han B, Tao Y.
Gene. 2007; 394: 13-24. [IF: 2.266]
PMID: 17408882   PDF

2006:

Differen, tiation of a Miniature Inverted Transposable Element (MITE) System in Asian Rice Cultivars and Its Inference for a Diphyletic Origin of Two Subspecies of Asian Cultivated Rice.
Hu H, Mu J, Zhang H, Tao YZ, Han B.
J Integr Plant Biol. 2006; 48: 260-267. [IF: 1.603]
PDF

Sequence analysis of mRNA polyadenylation signals of rice genes. (Peer Review in English)
Lu Y, Gao C, Han B.
Chinese Sci Bull. 2006; 51: 1069-1077. [IF: 1.087]
PDF

2005:

, The map-based sequence of the rice genome.
International Rice Genome Sequencing Project.
Nature 2005; doi:10.1038/nature03895.
  PDF

Anaerobic induction of isocitrate lyase and malate synthase in submerged rice seedlings indicates the important metabolic role of the glyoxylate cycle.
Lu Y, Wu Y, Han B.
Acta B, io, chim Biophys Sin (Shanghai). 2005; 37: 406-14. [IF: 1.547]
PMID: 15944756  PDF

A tiling microarray expressio, n analysis of rice chromosome 4 suggests a chromosome-level regulation of transcription.
Jiao Y, Jia P, Wang X, Su N, Yu S, Zhang D, Ma L, Feng Q, Jin Z, Li L, Xue Y, Cheng Z, Zhao H, Han B, Deng X.
Plant Cell. 2005; 17: 1641-57. [IF: 9.396]
PMID: 15863518  PDF

Computational identification of 69 retroposons in Arabidopsis.
Zhang Y, Wu Y, Liu Y, Han B.
Plant Physiol. 2005; 138: 935-48. [IF: 6.451]
PMID: 15923328   , PDF

2004:

Identification and analysis of a group of highly conserved trs-like genes in rice. [Article in Chinese]
Hu X, Hu H, Hong GF, Han B.
Yi Chuan Xue Bao. 2004; 31: 822-9. [IF: 0.813]
PMID: 15481538   PDF

Preparation of single rice chromosome for construction of a DNA library using a laser microbeam trap.
Liu X, Wang H, Li Y, Tang Y, Liu Y, Hu X, Jia P, Ying K, Feng Q, Guan J, Jin C, Zhang L, Lou L, Zhou Z, Han B.
J Bio, technol, . 2004; 109: 217-26. [IF: 2.970]
PMID: 15066759   PDF

Structural features of the rice chromosome 4 centromere.
Zhang Y, Huang Y, Zhang L, Li Y, Lu T, Lu Y, Feng Q, Zhao Q, Cheng Z, Xue Y, Wing R, Han B.
Nucleic Acids Res. 2004; 32: 2023-30. [IF: 7.836]
PMID: 15064362   PDF

Sequence variations of simple sequence repeats on chromosome-4 in two subspecies of the Asian cultivated rice.
Li C, Zhang Y, Ying K, Liang X, Han B.
Theor Appl Genet. 2004; 108: 392-400. [IF: 3.246]
PMID: 14564393  PDF,

The structural, transcriptional and homology analysis of two frr genes in rice. [Article in Chinese]
Hu X, Hu H, Hong G, Han B.
Zhi Wu Sheng Li Yu Fen Zi Sheng Wu Xue Xue Bao. 2004; 30: 10

2003
Genome- wide intraspecific DNA-sequence variations in rice. Han B*, Xue Y.
Curr. Opin. Plant Biol. 2003, 6, 134-138. PMID:12667869  PDF

Characterization of the copy number of RIRE 10 retrotransposon and transcriptional activity of its LTR in rice genome.
Wang R, Hong G*, Han B*.
Acta Bioch Bioph Sin. 2003, 135, 768-773. PMID:12897975 

2002
Sequence and analysis of rice chromosome 4.
Feng Q, Zhang Y, Hao P, Wang S, Fu G, Huang Y, Li Y, Zhu J, Liu Y, Hu X, Jia P, Zhang Y, Zhao Q, Ying K, Yu S, Tang Y, Weng Q, Zhang L, Lu Y, Mu J, Lu Y, Zhang LS, Yu Z, Fan D, Liu X, Lu T, Li C, Wu Y, Sun T, Lei H, Li T, Hu H, Guan J, Wu M, Zhang R, Zhou B, Chen Z, Chen L, Jin Z, Wang R, Yin H, Cai Z, Ren S, Lv G, Gu W, Zhu G, Tu Y, Jia J, Zhang Y, Chen J, Kang H, Chen X, Shao C, Sun Y, Hu Q, Zhang X, Zhang W, Wang L, Ding C, Sheng H, Gu J, Chen S, Ni L, Zhu F, Chen W, Lan L, Lai Y, Cheng Z, Gu M, Jiang J, Li J, Hong G, Xue Y, Han B*.
Nature 2002, 420, 336-340. PMID:12447439&nb, sp; PDF

A fine physical map of the rice chromosome 4.
Zhao Q, Zhang Y, Cheng Z, Chen M, Wang S, Feng Q, Huang Y, Li Y, Tang Y, Zhou B, Chen Z, Yu S, Zhu J, Hu X, Mu J, Ying K, Hao P, Zhang L, Lu Y, Zhang LS, Liu Y, Yu Z, Fan D, Weng Q, Chen L, Lu T, Liu X, Jia P, Sun T, Wu Y, Zhang Y, Lu Y, Li C, Wang R, Lei H, Li T, Hu H, Wu M, Zhang R, Guan J, Zhu J, Fu G, Gu M, Hong G, Xue Y, Wing R, Jiang J, Han B*.
Genome Res. 2002, 12, 817-823. PMID:11997348  PDF

Structural Analysis of a Gene Cluster Encoding DFR-like Proteins from Rice Chromosome 4.
Lei H, Zhou B, Zhang Y, Hong G*, Han B*.
Acta Bioch Bioph Sin. 2002, 34, 685-689. PMID:12417907

1997
Spontaneous duplication of a 661 bp element within a two-component sensor regulator gene causes phenotypic switching in colonies of Pseudomonas tolaasii, cause of brown blotch disease of mushrooms.
Han B, Pain A, Johnstone K.
Mol. Microbiol. 1997, 25, 211-218. PMID:9282733 PDF